Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015935270.1_cds_XP_016481139.1_72502
CDS Infomation	[gene=LOC107802196] [db_xref=GeneID:107802196] [protein=endoribonuclease Dicer homolog 1] [protein_id=XP_016481139.1] [location=join(22632..23567,23653..23766,28173..28383,28702..29096,29190..29415,29923..30095,30180..30302,30931..31091,31181..31414,31490..31640,31710..31892,34998..35159,35272..35367,35464..36089,36428..36528,36622..36821,36898..37818,37928..38092,38202..38569,38697..38874)] [gbkey=CDS]
Sequence	ATGGAGGTAGATGACGGTCGAGGTTCTGAGAAACCCTCATACTGGCTTGATGCTTGTGAG GATATTTCCTGTGATGAGTTTATTCAAGATTTTGTCCCCGTTGAGCCATCAAATCAATTG GGTCCGGTTGATGGTAGTGTTGATCCTTGTTTCTTTGGTGGAATTGATGGGATTCTTGAA AAATTAAAGAATGGTGATGATTCTGCACCTTGTGTGGATCACAATGACAGTAATGGATGT AGTAAAGGTTCAGCTGCAGCTGAAATTATCAAGTACAATGAGCCACAAGTTAACAAGGAT AATACTAAGCAGAATGGAAGTGACAGGGGAAAGAAGTCCTTGCATGAAGGAAATGGACTT TCTAGGCATAAGGAACGAGATTATCATGAAGAGAGAAATGGCAAAAGGGCACGACTCCGT GGTGTTAGCCGCGAGAAGAGAGGCCGCGATAGACCACCTTTGGCAGCTAGGAAGAGATTC CGCGACCACGAGAGTGATGAGATCAATAGAGTAGATAGGGATCACAGGAAGAGAAGGGAA AATCATGGTATGAGAGATAGGGATTGGAGGGAAGGAAGGGGCTTTTGGGAAAGGGACAAA GAAAAGAATGAGATGGTATTTCGGGTAGGTTCATGGGAAGCAGATAGAAATCGAGAGGGG AAGTTACTGACTGAGAGGAGCGTTGAACATTCTGGAGCTATTGAGAAGAAAGATGTTCAA CCAAAGGAACAAGCTCCCAAGGAGCAAGCACGCAAGTATCAGTTGGATGTACTTGAGCAT GCCAGAAAGAAAAATACAATTGCTTTTCTTGAAACAGGAGCAGGAAAAACGCTTATTGCC ATCCTCCTCATGAAGAGTCTATGTAATGACTTGCACAAACAGAACAAGAAGATGCTGGCT GTCTTTCTGGTCCCTAAAGTTCCACTTGTTTATCAGCAAGCAGAAGTTATTCGTGAGCAA ACTGGTTATCAAGTTGGCCATTATTGTGGTGAGATGGGCCAAGATTTTTGGGATGCACGA AGGTGGCAGCGTGAGTTTGAAACTAAACAGGTCTTGGTTATGACTGCTCAGATTCTTCTG AACATCTTGAGGCACAGTATAATAAAAATGGAAGCAATTAATCTCCTTATTCTGGATGAA TGCCATCATGCTGTGAAGAAGCATCCGTATTCTTTAGTAATGTCTGAGTTCTATCATACA ACGCAAAAGGAGAAAAGGCCATCTGTTTTTGGCATGACTGCTTCACCTGTTAACTTGAAG GGTGTTTCCAGCCAAGTTGATTGTGCAATAAAGATTCGTAATTTGGAAACGAAATTAGAT TCAGTCGTCTTTACCATAAAGGACCGCAAGGACCTCGAGAAACATGTGCCAATGCCGTCA GAAGTAGTAGTGGAGTATGATAAAGCTGCTAGTTTGTGGTCCCTTCATGAACAAATAAAA CAAATGGAATCAGCGGTTGAAGAAGCTGCACAGTCAAGTTCCAGAAGAAGTAAATGGCAA TTTATGGGCGCTCGTGATGCTGGAGCTAGAGAAGAGCTGCGCCAAGTCTATGGTGTATCT GAAAGAACTGAAAGTGATGGGGCTGCTAATTTAATTCAAAAGTTGAGGGCTATCAACTAT GCTCTTGGTGAACTGGGACAGTGGTGTGCCTATAAGGTAGCACGCTCTTTTTTAACAGCT TTACAAAATGATGAAAGGGCAAGCTACCAGCTTGATGTCAAGTTCCAAGAATCCTACCTA GATAAGGTTGTCTCTCTCTTGCAATGCCAGTTATCAGAGGGAGCAGTTGCAGAAAATGGT AAGATGGATGAAGGTAACAATCCGAATAGTGATTGTGATAGGCCTGATGAGATGGAGGAG GGCGAGCTTCTTGAAAGTCATGTTGTATCTAGTGGAGAGCATGTAGATGTGACTTTAGGA GCTGCTGTGGCTGATGGGAAAGTGACACCAAAAGTTCAATCATTAATTAAGATACTTCTC AAGTATCAGCATACAGAGGATTTTCGTGCTATAATATTCGTTGAGCGTGTTGTGACAGCC TTGGTTCTTCCGAAGGTTTTTGAGGAGCTCCCTTCACTAAGTTTTATCACTTCATCAAGT TTAATTGGGCATAACAATAGTCAAGAAATGCGAACAGGCCAAATGCAGGACACGATAGCC AAATTTCGAGATGGTCGTATGAATTTGTTAGTTGCTACTAGTGTTGCTGAGGAAGGACTT GACATACGGCAATGCAATGTTGTTATCCGGTTTGACCTGGCCAAAACTATTTTGGCTTAT ATCCAGTCTAGGGGTCGTGCCCGTAAGCCTGGATCAGATTATATTTTGATGGTTGAGAGA GATAATTTGTCGCATGAAGCATTTCTGAGGAATGCCAGAAACAGTGAAGAGACATTGCGG AAAGAAGCAATTGAGCGGACTGATATTAGTCATCTCAAAGGTGCCTCCAAGTTGATCTCT GGGGAGGCACCAACAGATTCAGTTTATCAGGTGGAGTCCACTGGAGCTGTTGTGAGCTTA AATTCTGCTGTTGGGCTGATCCACTTCTATTGCTCCCAGCTACCAAGTGACAGGTACTCA ATTCTCCGTCCTGAGTTTATAATGGAGCGTCATGAGAAGCCAGGTGGCCCTACTGAATAT TCATGTAGGCTTCAACTCCCGTGCAATGCACCTTTCGAGAAACTTGAGGGCCCTGTGTGC AGCTCAATGCGCCTTGCCCAGCAGGCTGTTTGTTTGGATGCTTGCAAGAAGCTCCACCAG ATGGGGGCATTTACAGACATGCTCTTGCCAGACAAGGGAAGCGGGGCAGAGTTGGAGAAA GCTGAACAGGAAGATGAAGGTGATCCAATTCCCGGAACTTCCAGGCACAGGGAATTTTAT CCTGAAGGTGTAGCTGATATTCTCAAGGGTGAATGGATTTTGTCGGGGAAGGATTCTTGT GACAGCTCAAAGTTGGTTCACCTCTATATGTATGCTATCAAATGTGTGAATATTGGCACC TCGAAGGACCCATTCTTAACTGATGTGTCAGAGTTTGCAATACTGTTTGGCAATGAGCTG GATGCAGAGGTATTATCGATGTCGATGGATTTATTTATTGCTCGGACTGTAGAAACAAAG GCGACTCTTGTCTTCAGAGGGCCAATAGAAGTGACAGAGTCTCAGTTGGCGTCCCTTAAG AGCTTTCATGTAAGAATGATGAGCATTGTATTGGATGTTGATGTTGAGCCATCCACCACT CCTTGGGACCCTGCAAAGGCATATCTATTTGCCCCTGTTACTGGTGATGAATCTGGAGAT CCTATAAAAGATATCAACTGGGATCTTATTAAAAAAATTACTAAAACTGATGTATGGAGC AATCCTCTTCAGAAAGCTCGTCCAGATGTATATCTTGGCACCAGTGAACGTGCTCTTGGT GGAGATCGAAGGGAATATGGCTTTGCGAAATTGCGACATGGTATGGCATTTGGATTGAAG TCTCATCCTACATACGGTGTTAGAGGTGCTATTGCAAACTTTGATGTGGTCAAAGCATCT GGATTGGTCCCTCACCGGAGTAGCCTTGATTTGGTTGAAGTTGATTCGAGTAAAGACAAG ATAATGATGGCTGACTGTTGTCTTAGAGCAGAAGATATTGTAGGGAGAATTGTCACTGCA GCTCACTCTGGAAAGAGATTTTATGTTGATTGCATTCCCAATGATATGACTGCAGAGAAC TCATTTCCTAGGAAAGAAGGTTACCTAGGTCCTCTTGAGTACAGCAGTTATGCTGCTTAT TACAAGCAAAAGTATGGAGTTGATTTGGTCTATAAAAAGCAGCCTCTATTAAGAGGCCGT GGTGTTTCATATTGCAAGAACCTTCTGTCACCACGATTTGAACATTCAGAAGAACACGAG GGTGAACTTGAAGAAGCTACTGACAAAACATATTATGTTTTCCTCCCTCCTGAGCTCTGC TTTTTACATCCACTTCCGGGATCCCTTGTTCGGGGTGCTCAGAGATTGCCCTCGATCATG AGGAGGGTTGAGAGCATGCTGCTTGCTGTTCAGCTTAAGGATATGATTGGTTACCCTGTC CCAGCACTGAAGATCTTGGAAGCATTGACAGCTGCTTCCTGCCAAGAGACTTTCTGCTAT GAAAGAGCAGAGCTTCTTGGAGATGCCTATCTGAAATGGGTTGTTAGTCGGTATCTTTTC CTTAAATATCCCCAGAAACATGAAGGCCAACTCACCAGGATGAGACAACAATTGGTAAGC AACATGGTCTTGTACCAATATGCCTTAAATAAGGGACTCCAATCATACATCCAAGCAGAT CGATTTTCTCCATCGAGATGGGCCGCTCCAGGGGTGTTGCCTGTGTATGACGAGGACACC AATGAAGAGGAGTTGTCCATATTTGGTCATGAAATAACAGAAAATGGGACTGTAGCAGCA AAGACACTTGCTGCTGATGAGTTTGAAGATGAGGAAGCTGAAGAAGGTGAGCTTGATACC GATTCAGGTTCGTATCGTGTACTCTCTAGCAAGACGATGGCTGATGTTGTGGAAGCACTG ATTGGCGTATATTATGTTGATGGTGGAAAGTATGCTGCAAACCACTTCATGAAATGGATC GGGGTTGAGGTTGATTTCGACTTCAAAGAGACTGAGTACTCTATTAGGCCTTATAGCATT CCCGAGAATGTACTCAGGAGTGTTGACTTTGATAAATTACAAGGTGCTCTGAACATCAGC TTCAATGATAAAGGCCTACTGCTAGAAGCAATTACTCATGCTTCACGCCCGTCTTCTGGG GTCTCCTGTTATCAAAGACTGGAGTTTGTGGGTGATGCAGTACTAGATCATCTCATCACG AGGCACTTGTTCTTTACATACACAGATCTTCCCCCTGGCCGATTAACCGACTTGAGAGCT GCAGCTGTGAACAATGAGAATTTTGCACGTGTTGCGGTTAAACATGGCCTTCATTTACAC CTTCGTCATGGATCCAGTGCTCTAGAAAAGCAGATTCGTGACTTTGTGAGTGAGGTTAAG AATGAACTATCGAAACCAGGTTTCAACTCCTTTGGTTTAGGGGATTGCAAAGCTCCTAAA GTTCTTGGTGATATTTTTGAATCAATTGCTGGGGCTATTTTTCTTGACAGTGGGTGTGAT ACTGCAGCTGTGTGGAAGGTTTTTCAACCATTGTTGCATCCAATGGTCACACCAGAAACA CTGCCGATGCATCCAGTTCGTGAACTACAAGAACGCTGTCAACAACAAGCTCAAGGCTTA GAGTACAAAGCGAGTCGAAGTGGGAATATAGCTACAGTTGAAGTATATGTTGATGGTATT CAGGTTGGAATGGCTCAGAATCCTCAAAAGAAAATGGCACAGAAGTTGGCTGCCAGGAAT GCCCTTGTTGTGTTGAAAGAGAGGGAGGAAGCCGAAGCTAAGAAGGCTGAAGATGGGAAG AAAAAGAAGAACGGAAACCCGTCGTATACCAGGCAGACATTGAATGATATATGCTTACGT AGAAATTGGCCTATGCCACTGTATCGAAGTGTGCACGAGGGTGGCCCAGCACATGCAAAG AGGTTTACATATGGTGTACGCGTAAATACTTCGGACAAAGGATGGACAGATGAATGTATC GGGGAACCTATGCCGAGTGTAAAGAAAGCCAAGGATTCTGCAGCGTCTCTACTACTGGAA CTCTTAAATAGATGGTATTCATGA

Peptide Sequence

PEP ID	XP_016481139.1
PEP Infomation	PREDICTED: endoribonuclease Dicer homolog 1 [Nicotiana tabacum]
Sequence	MEVDDGRGSEKPSYWLDACEDISCDEFIQDFVPVEPSNQLGPVDGSVDPCFFGGIDGILE KLKNGDDSAPCVDHNDSNGCSKGSAAAEIIKYNEPQVNKDNTKQNGSDRGKKSLHEGNGL SRHKERDYHEERNGKRARLRGVSREKRGRDRPPLAARKRFRDHESDEINRVDRDHRKRRE NHGMRDRDWREGRGFWERDKEKNEMVFRVGSWEADRNREGKLLTERSVEHSGAIEKKDVQ PKEQAPKEQARKYQLDVLEHARKKNTIAFLETGAGKTLIAILLMKSLCNDLHKQNKKMLA VFLVPKVPLVYQQAEVIREQTGYQVGHYCGEMGQDFWDARRWQREFETKQVLVMTAQILL NILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTQKEKRPSVFGMTASPVNLK GVSSQVDCAIKIRNLETKLDSVVFTIKDRKDLEKHVPMPSEVVVEYDKAASLWSLHEQIK QMESAVEEAAQSSSRRSKWQFMGARDAGAREELRQVYGVSERTESDGAANLIQKLRAINY ALGELGQWCAYKVARSFLTALQNDERASYQLDVKFQESYLDKVVSLLQCQLSEGAVAENG KMDEGNNPNSDCDRPDEMEEGELLESHVVSSGEHVDVTLGAAVADGKVTPKVQSLIKILL KYQHTEDFRAIIFVERVVTALVLPKVFEELPSLSFITSSSLIGHNNSQEMRTGQMQDTIA KFRDGRMNLLVATSVAEEGLDIRQCNVVIRFDLAKTILAYIQSRGRARKPGSDYILMVER DNLSHEAFLRNARNSEETLRKEAIERTDISHLKGASKLISGEAPTDSVYQVESTGAVVSL NSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCRLQLPCNAPFEKLEGPVC SSMRLAQQAVCLDACKKLHQMGAFTDMLLPDKGSGAELEKAEQEDEGDPIPGTSRHREFY PEGVADILKGEWILSGKDSCDSSKLVHLYMYAIKCVNIGTSKDPFLTDVSEFAILFGNEL DAEVLSMSMDLFIARTVETKATLVFRGPIEVTESQLASLKSFHVRMMSIVLDVDVEPSTT PWDPAKAYLFAPVTGDESGDPIKDINWDLIKKITKTDVWSNPLQKARPDVYLGTSERALG GDRREYGFAKLRHGMAFGLKSHPTYGVRGAIANFDVVKASGLVPHRSSLDLVEVDSSKDK IMMADCCLRAEDIVGRIVTAAHSGKRFYVDCIPNDMTAENSFPRKEGYLGPLEYSSYAAY YKQKYGVDLVYKKQPLLRGRGVSYCKNLLSPRFEHSEEHEGELEEATDKTYYVFLPPELC FLHPLPGSLVRGAQRLPSIMRRVESMLLAVQLKDMIGYPVPALKILEALTAASCQETFCY ERAELLGDAYLKWVVSRYLFLKYPQKHEGQLTRMRQQLVSNMVLYQYALNKGLQSYIQAD RFSPSRWAAPGVLPVYDEDTNEEELSIFGHEITENGTVAAKTLAADEFEDEEAEEGELDT DSGSYRVLSSKTMADVVEALIGVYYVDGGKYAANHFMKWIGVEVDFDFKETEYSIRPYSI PENVLRSVDFDKLQGALNISFNDKGLLLEAITHASRPSSGVSCYQRLEFVGDAVLDHLIT RHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHGLHLHLRHGSSALEKQIRDFVSEVK NELSKPGFNSFGLGDCKAPKVLGDIFESIAGAIFLDSGCDTAAVWKVFQPLLHPMVTPET LPMHPVRELQERCQQQAQGLEYKASRSGNIATVEVYVDGIQVGMAQNPQKKMAQKLAARN ALVVLKEREEAEAKKAEDGKKKKNGNPSYTRQTLNDICLRRNWPMPLYRSVHEGGPAHAK RFTYGVRVNTSDKGWTDECIGEPMPSVKKAKDSAASLLLELLNRWYS

Transcript Sequence

Gene sequence data has not been registered.